dandelion.polars.tools.clone_degree

dandelion.polars.tools.clone_degree(vdj, weight=None)[source]

Calculate node degree in BCR/TCR network.

Parameters:

  • vdj (DandelionPolars) – DandelionPolars object after tl.generate_network has been run.

  • weight (str | None, optional) – Attribute name for retrieving edge weight in graph. None defaults to ignoring this. See networkx.Graph.degree.

Returns:

Modifies vdj._metadata in place, adding a clone_degree column.

Return type:

DandelionPolars

Raises:

  • AttributeError – if graph not found.

  • TypeError – if input is not DandelionPolars class.