dandelion.Dandelion.write_10x

Dandelion.write_10x(folder='dandelion_data', filename_prefix='all', sequence_key='sequence', clone_key='clone_id')

Writes a Dandelion class to 10x formatted files so that it can be ingested for other tools.

Parameters:

• folder (Path | str, optional) – path to save the 10x formatted files.

• filename_prefix (str, optional) – prefix for the 10x formatted files.

• sequence_key (str, optional) – column name in .data slot to retrieve and write out in fasta format.

• clone_key (str, optional) – column name in .data slot for clone id information.

Return type:

None